Coastal systems tend to be an order of magnitude more variable than open ocean systems in terms of physical and biogeochemical processes. As a result sampling programs designed for open ocean systems may not accurately characterize coastal environments, can provide a biased view of the contribution of these systems to the global carbon cycle and for the purposes of this program, to atmospheric carbon dioxide concentrations over North America. The North American Carbon Experiment will therefore clearly require a program focused on understanding the role of coastal systems have in affecting atmospheric CO2 distributions. Episodic and seasonal nutrient injections, through upwelling and riverine input, support high rates of primary productivity that contribute significantly to carbon export from surface waters, across the continental shelf and into the deep ocean. At the same time the upwelling of deep cold water, enriched in CO2 as a result of the respiration of settling particles, may represent a localized source of atmospheric CO2. Even if the net air-sea CO2 flux, resulting from deep-water ventilation and biological productivity, may be close to zero, the spatial and temporal decoupling of these two processes can produce transient gradients in atmospheric CO2 in the atmospheric boundary layer of coastal regions. The spatial and temporal separation of sources (upwelling nutrients) and sinks (primary production) act to extend the size of the coastal domain further from shore. Other processes such as the production and consumption of dissolved organic matter and denitrification also can extend the influence of coastal processes well into the ocean interior. As mentioned previously climatic variability strongly regulates the size of the productive domain (see Chavez et al., in press for the effects of El Niņo on the west coast of north America). The size of the coastal footprint can then vary from 50 to 500 km from shore or by an order of magnitude depending on environmental conditions. Under certain conditions the contributions of coastal areas, normally considered to be small relative to open ocean regions because of areal extent, to global budgets may be significant and underestimated.